Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904765.1_cds_XP_016454897.1_48876
CDS Infomation

[gene=LOC107779069] [db_xref=GeneID:107779069] [protein=TMV resistance protein N-like isoform X2] [protein_id=XP_016454897.1] [location=complement(join(12499..13126,13431..13939,14804..15919,16301..16726,17251..18376,22543..23015))] [gbkey=CDS]
Sequence

ATGGAGGAAATTCAGACCACAACTTCACTCCCATCGCTAAGGCTGAATTACGACGTGTTC
TTGAGTTTTAGAGGCGAAGATACTCGCGAAAACATCACTAAAAACTTATACGATGCCTTA
TACTCAAAAGGCGTCCGAGTGTTTCGAGACACAAACGGGTTAACTCAGGGCGACGAGATC
GCACCAGGTCTTATGGACGCAATCAACGATTCAGCTGCAGCTATTGCTATTATTTCACCC
AATTATGCTTCGTCGAGATGGTGTCTAGAGGAATTAGCAACGATTTGTGAGTTGGGTAAA
CTCGTTCTGCCCGTGTTCTACCGGGTTGACCCGTCGGATGTTCGAAGGCAGAGAGGACCG
TTTCTACATGATTTTGAGAGTTTGGAAGGAAGATTTGGAGTGGAAAAGGTGGTGAGATGG
AGAAATGCTATGGAAAGAGTTGGGGGAATCTCCGGCTGGGTTTATTATAATAGTGAAGAG
TCACAGTTGATACAGACTTTGGTGAAAAGAGTTTTACAAGAATTGAGCAATTCCCCAATA
TTTGTAGCTCCATTTGTTGTTGGAATTGACTACCGTCTGGAAGAACTCATAAGACAGTTA
GATGTGAAGCGCAGTGGTGTCAAGATCATTGGGTTGCATGGAATAGGAGGAGTTGGTAAA
ACAACTCTTTCTAAGGCTCTTTATAATAAACTTGCTTCTCATTTTACACACAGGGCTTTT
ATCTTGAATGTTAAGGAAATAGCTGCTCAACAAGGCATTGTGTCCGTTCAGAAGAAAATA
ATACAAGGTCTTTTCCCGAGCAAGGTCTTCTCCTTCTCCCCTGGTAATGCACATGAAAGA
AGAGTAAAATTCGGACGATTTCTTCAAGAAAAGCGTGTCCTGCTCGTCTTAGATGATGTA
GATTATGTAAATGATGATGTAAGCATATTGAAGGCACTAATTGGAGGGAAAAACTGGTTC
TTTGAAGGGAGCAGGGTTGTTATTAGTACTAGAAACAGAGGAATTTTGCTAGAAGACATC
GTTAACGAGACATTTGAGGTGAGAGAATTGGGTGGTCCTGACTCACTAAAACTATTCAGT
TACCATGCATTTAGAAGACAGGAGCCATTTCCAGCTTTTGTGAATATGTCCAAGCAAATT
GTCTCAATCACTGGAGGGCTACCCTTGGCTCTTGAAGTTTTTGGTTCTTTCTTGTTTGAT
AAAAGAAGCGAGGAGGAATGGCTAGATGCTCTAGAAAAGCTAAAACAAATTCGCTCTCCA
CATCTTCAGGAAATCTTGAAAATAAGTTATGATGGTCTTGATGATGAAGAGAAGTGTATA
TTCCTGGATGTTGCATGTTTATTTCTTGATCAATTAGAAAAGAAAGCTGAAGATGTAATT
GATGTGATGAAAGGATGTGGTTTTAGAGCCAGCATTGCATTTGACACTTTAACTGCTAGA
TCATTGATTAAGGTAATTGATGGTGGGGATTTGTGGATGCATGACCAGATAAGAGATATG
GGAAGACAAATTGTTATACAACAAGGCATTTCAGATCCCGGAAAGCGCAGCAGACTTTGG
GATGTTGCTGATGTTTTGAGTGTGTTACAAGGAAGGAAGGGGACACAGAACATCCAAGGG
ATCATCCTGGATCAGTATCAGAAGCCATCATCAAAGATTAAAAGCACGAAAGCAATTACT
AGAGAGCATTTTCAACAAGTTCCCACTTTTACTTCTGCATTAGCTTACATTAAAGAGTTG
TGCAAAGAACAATTTCAAAATGATGCAAAAGAAACCAATGATTTGGTATTGAACACTGAA
GCATTTGATCCAATAGTTAATCTGCGGCTACTCCAATTCGATAATGTGAAACTAGAGGGA
AATTTGGGGAAGTTACCTTCTTCACTAAAATGGCTCCAATGGAAAAGGTGCACACTTTCA
AGCTTTTATTCTGATTATTATCCAAGTGAACTTACCATGCTTGATCTCTCAGAGAGCCAA
ATAGAGAAGTTTGGAAGCCGGGAATGGACTTGGACTCGCAAAAAGGTGGAAAACAAGTTG
ATAGTTATGAATCTCTCTGGTTGTCATAAAATAACAGCTATTCCTGATTTATCCACGCAT
AAAGCATTGGAAAAGTTGATAGCTGAACGTTGCAGTGCATTGCAAAGGATTCACAGAACA
ATTGGGAATCTGAAAACTTTACGTCATTTAAATTTAAGAGATTGCCGCAACCTTGTTGAA
TTTCCAGGTGAAGTCTCCGGGCTGAAAAATCTTCAAAAGCTGATACTCTCGGGCTGCTCG
AGATTGAAACAGTTACCTGAAGATATAGGCAAGATGAAGTCCTTACAAGAACTTCTATTA
GATGGGACTGCTATAGAGAAGTTGCCTGAAAGTATATTTCGCTTAACAAAACTTGAGAAG
TTAAGCTTAAGCCAGTGCCACTCACTGAAACAACTTTCCCGGTTCATAGGAAAGCTAAGT
TCTTTGAAGGAACTCTCTCTTAATGGTTCTGCTTTGGAAGAAATACCTGATTCTATTGAA
CATTTGCAGAACCTTCATACATTAAACTTAATTAGGTGTGAGTCACTTGCTGCTATTCCC
AATTCTTTTGGCAACCTCAAATCTTTAGCAAATCTCTGGCTTTATGGCAGTGCAATAAAA
ATGATGCCAGAATCTATTGGTTCTCTGTATTATCTTAGGTCCTTATCGCTCGGAAACAGT
CAGCATTTAAATGCATTGCCTGTTTCAATTAAAGGATTGTCTTCTTTGGTTGAGCTTCAA
ATAGACAAGGTTCCAATTATTAGTCTTCCAGATCATGTTTTTGGTGGACTTAAATCACTG
AAGAATCTTGAGATAAGGAACTGTGAGCGCCTTGGCTCGCTTCCCCACTCCATTGGAGAA
TTGTTAGCTCTTAGAACAATGACTCTTACCAGAAATGATGCTATTACGGAGCTGCCAGAA
TCAGTTGGGAATTTGCAGAATCTTGTCATATTGAGATTGACCAGATGTAAGCGACTTTGC
AAATTGCCAGCTTCAATTGGGGAACTAAAGAACTTAGTACACCTGCTAATGGAGGAGACT
TCAGTAACAAAATTACCTGAAACATTTGGGATGCTATCGAGCTTAATAATTCTGAAGATG
GGAAAGAAGCCTTTCTGCCAGGTATCACAAAGTACTGAAAACACAGAAGCAGCTACCTAC
ACAGAAAGGGAAACATCACCTGTTGTGCTTCCTTCATCTTTCTCAGAGCTATCCATGTTA
GAAGAACTTGATGCCCGCGCGTGGGGAATAGTTGGGAAAATACCGGATGATTTTGAGAAA
CTATCATCTTTGGAGATCATCAATCTTGGTTTCAATGATTTTTCCTATCTCCCGTCTAGT
CTGAAAGGACTACTTTTCTTGAAAGAGCTCCTTGTTCCCCACTGCAAACAGTTGAAAGCT
ATTCCTCCTCTTCCCTCAAGTTTGCTCAAGATAAATGCTGCAAACTGTGGAGCACTCGAG
AGCATACACGATATCTCAAAATTAGAGTTCTTGCACGAGCTAAACCTTGCAAATTGCATG
AGTTTGGTAGATATCCAAGGTATCGAATGCTTGAAATCCTTAAGAATGCTACATATGGCT
GGATGCAATGTCTCCTGTGCCTTTATGGTTAGAAGCAAACTTGATAAGGTTGCTGTGAAA
AACTTGTATAATTTTAGCATTCCAGGCAGTGAAATCCCAAGTTGGTTAACTCCAGGTGAG
GTGCATTTCTCAAAACACAGAAACAATGAAATTAAAGCAGTGGTTATTGCCATAGTTGTG
TCAGTGAACTGTGCTAAACCAGATGATTTAAGGGATGAATTGCCTGTAATAGCTAACATC
CATGCAAAAATCGTTAGAGCAAATCGAGCAGTTTATACTACTGGTATGTACTTGGTAGGA
GTCCCAACTACGCCCGAGGATCAAGTTTACTTGTGCAGGTACCAAGATTATCATCCACTA
GTTTCTATACTCGAGGATGGTGATATAATACAGGTGGGCTTGGGCAACTTTCCCATTACT
GGGATTGAACTGAAGAAGTGTGGAATACATTTAGTTTATGAAAGTGATGATGATTATGAA
GGTAATGAGGAATCATTGGATGAGAGCCAACAATCTGTATCAGAAAGATTAACAAGGTTT
ATTGGGGCTTCTAATACAGAGAGCAATGTATTCAGCTCGAACTCAGCTCAAGAAGATGGA
GAAGAGGAAAGAAGGCATAACTATTTTAGTTTCGTTAAGGAGATTTTCTGTGCTTTAAAA
TACCTTCTCTTTAGGTGA

Peptide Sequence

PEP ID

XP_016454897.1
PEP Infomation

PREDICTED: TMV resistance protein N-like isoform X2 [Nicotiana tabacum]
Sequence

MEEIQTTTSLPSLRLNYDVFLSFRGEDTRENITKNLYDALYSKGVRVFRDTNGLTQGDEI
APGLMDAINDSAAAIAIISPNYASSRWCLEELATICELGKLVLPVFYRVDPSDVRRQRGP
FLHDFESLEGRFGVEKVVRWRNAMERVGGISGWVYYNSEESQLIQTLVKRVLQELSNSPI
FVAPFVVGIDYRLEELIRQLDVKRSGVKIIGLHGIGGVGKTTLSKALYNKLASHFTHRAF
ILNVKEIAAQQGIVSVQKKIIQGLFPSKVFSFSPGNAHERRVKFGRFLQEKRVLLVLDDV
DYVNDDVSILKALIGGKNWFFEGSRVVISTRNRGILLEDIVNETFEVRELGGPDSLKLFS
YHAFRRQEPFPAFVNMSKQIVSITGGLPLALEVFGSFLFDKRSEEEWLDALEKLKQIRSP
HLQEILKISYDGLDDEEKCIFLDVACLFLDQLEKKAEDVIDVMKGCGFRASIAFDTLTAR
SLIKVIDGGDLWMHDQIRDMGRQIVIQQGISDPGKRSRLWDVADVLSVLQGRKGTQNIQG
IILDQYQKPSSKIKSTKAITREHFQQVPTFTSALAYIKELCKEQFQNDAKETNDLVLNTE
AFDPIVNLRLLQFDNVKLEGNLGKLPSSLKWLQWKRCTLSSFYSDYYPSELTMLDLSESQ
IEKFGSREWTWTRKKVENKLIVMNLSGCHKITAIPDLSTHKALEKLIAERCSALQRIHRT
IGNLKTLRHLNLRDCRNLVEFPGEVSGLKNLQKLILSGCSRLKQLPEDIGKMKSLQELLL
DGTAIEKLPESIFRLTKLEKLSLSQCHSLKQLSRFIGKLSSLKELSLNGSALEEIPDSIE
HLQNLHTLNLIRCESLAAIPNSFGNLKSLANLWLYGSAIKMMPESIGSLYYLRSLSLGNS
QHLNALPVSIKGLSSLVELQIDKVPIISLPDHVFGGLKSLKNLEIRNCERLGSLPHSIGE
LLALRTMTLTRNDAITELPESVGNLQNLVILRLTRCKRLCKLPASIGELKNLVHLLMEET
SVTKLPETFGMLSSLIILKMGKKPFCQVSQSTENTEAATYTERETSPVVLPSSFSELSML
EELDARAWGIVGKIPDDFEKLSSLEIINLGFNDFSYLPSSLKGLLFLKELLVPHCKQLKA
IPPLPSSLLKINAANCGALESIHDISKLEFLHELNLANCMSLVDIQGIECLKSLRMLHMA
GCNVSCAFMVRSKLDKVAVKNLYNFSIPGSEIPSWLTPGEVHFSKHRNNEIKAVVIAIVV
SVNCAKPDDLRDELPVIANIHAKIVRANRAVYTTGMYLVGVPTTPEDQVYLCRYQDYHPL
VSILEDGDIIQVGLGNFPITGIELKKCGIHLVYESDDDYEGNEESLDESQQSVSERLTRF
IGASNTESNVFSSNSAQEDGEEERRHNYFSFVKEIFCALKYLLFR

Transcript Sequence

Gene sequence data has not been registered.